A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7173



Internal ID15205470
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:16559079..16937819hg38UCSC Ensembl
Outerchr1:16885574..17264314hg19UCSC Ensembl
Outerchr1:16758161..17136901hg18UCSC Ensembl
Outerchr1:16630880..17009620hg17UCSC Ensembl
Cytoband1p36.13
Allele length
AssemblyAllele length
hg38378741
hg19378741
hg18378741
hg17378741
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3851, nssv11237, nssv5314, nssv10507, nssv657, nssv1903, nssv10882, nssv747, nssv1777, nssv1893, nssv10523, nssv6334, nssv9691, nssv9949, nssv9355, nssv929, nssv9405, nssv3861, nssv10485, nssv5304, nssv1863, nssv1910, nssv3885, nssv10890, nssv9682, nssv5331
SamplesNA18517, NA18507, NA15510, NA18956, NA19129, NA12156, NA12878, NA19240, NA18555
Known GenesCROCC, CROCCP2, ESPNP, LOC729574, MIR3675, MST1L, MST1P2, NBPF1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7173
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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