A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv6899



Internal ID15205168
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:49581034..49612677hg38UCSC Ensembl
OuterchrX:49345637..49377280hg19UCSC Ensembl
OuterchrX:49232581..49264232hg18UCSC Ensembl
OuterchrX:49048848..49080528hg17UCSC Ensembl
CytobandXp11.23
Allele length
AssemblyAllele length
hg3824098
hg1924098
hg1824098
hg1724098
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3786, nssv869, nssv10707, nssv3787, nssv5223
SamplesNA18956, NA19129, NA12878, NA19240
Known GenesGAGE1, GAGE12C, GAGE12D, GAGE12E, GAGE12H, GAGE2A
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv6899
Frequency
Sample Size9
Observed Gain4
Observed Loss0
Observed Complex0
Frequencyn/a


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