A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv6563406



Internal ID20936477
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:25888425..29704317hg38UCSC Ensembl
chr6:25888653..29672094hg19UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg383815893
hg193783442
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv18270908
Samples
Known GenesABT1, BTN1A1, BTN2A1, BTN2A2, BTN2A3P, BTN3A1, BTN3A2, BTN3A3, C6orf100, GABBR1, GPX5, GPX6, GUSBP2, HCG11, HCG14, HFE, HIST1H1A, HIST1H1B, HIST1H1C, HIST1H1D, HIST1H1E, HIST1H1T, HIST1H2AB, HIST1H2AC, HIST1H2AD, HIST1H2AE, HIST1H2AG, HIST1H2AH, HIST1H2AI, HIST1H2AJ, HIST1H2AK, HIST1H2AL, HIST1H2AM, HIST1H2BB, HIST1H2BC, HIST1H2BD, HIST1H2BE, HIST1H2BF, HIST1H2BG, HIST1H2BH, HIST1H2BI, HIST1H2BJ, HIST1H2BK, HIST1H2BL, HIST1H2BM, HIST1H2BN, HIST1H2BO, HIST1H3A, HIST1H3B, HIST1H3C, HIST1H3D, HIST1H3E, HIST1H3F, HIST1H3G, HIST1H3H, HIST1H3I, HIST1H3J, HIST1H4A, HIST1H4B, HIST1H4C, HIST1H4D, HIST1H4E, HIST1H4F, HIST1H4G, HIST1H4H, HIST1H4I, HIST1H4J, HIST1H4K, HIST1H4L, HMGN4, LINC00240, LINC01012, LINC01015, LOC100129636, LOC100131289, LOC100270746, LOC285819, LOC401242, MAS1L, MIR3143, MOG, NKAPL, OR10C1, OR11A1, OR12D2, OR12D3, OR14J1, OR2B2, OR2B3, OR2B6, OR2H1, OR2H2, OR2J2, OR2J3, OR2W1, OR5V1, PGBD1, POM121L2, PRSS16, SCAND3, SLC17A2, SNORD32B, TOB2P1, TRIM27, TRIM38, UBD, VN1R10P, ZFP57, ZKSCAN3, ZKSCAN4, ZKSCAN8, ZNF165, ZNF184, ZNF192P1, ZNF204P, ZNF311, ZNF322, ZNF391, ZSCAN12, ZSCAN12P1, ZSCAN16, ZSCAN16-AS1, ZSCAN23, ZSCAN26, ZSCAN31, ZSCAN9
MethodSequencing
Analysis
Platform
Comments
ReferenceSedlazeck_et_al_2020
Pubmed ID99999999
Accession Number(s)nsv6563406
Frequency
Sample Size19652
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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