A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv6562568



Internal ID20935639
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:29766029..31471345hg38UCSC Ensembl
chr6:29733806..31439122hg19UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg381705317
hg191705317
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv18270532
Samples
Known GenesABCF1, ATAT1, C6orf136, C6orf15, CCHCR1, CDSN, DDR1, DHX16, DPCR1, FLOT1, GNL1, GTF2H4, HCG17, HCG18, HCG22, HCG26, HCG27, HCG4, HCG4B, HCG8, HCG9, HCP5, HLA-A, HLA-B, HLA-C, HLA-E, HLA-G, HLA-H, HLA-J, HLA-L, IER3, LOC554223, MDC1, MICA, MIR4640, MIR6891, MIR877, MRPS18B, MUC21, MUC22, NRM, POU5F1, PPP1R10, PPP1R11, PPP1R18, PRR3, PSORS1C1, PSORS1C2, PSORS1C3, RNF39, RPP21, SFTA2, TCF19, TRIM10, TRIM15, TRIM26, TRIM31, TRIM39, TRIM39-RPP21, TRIM40, TUBB, VARS2, ZNRD1, ZNRD1-AS1
MethodSequencing
Analysis
Platform
Comments
ReferenceSedlazeck_et_al_2020
Pubmed ID99999999
Accession Number(s)nsv6562568
Frequency
Sample Size19652
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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