A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv6556



Internal ID15551477
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:70689242..70748182hg38UCSC Ensembl
Outerchr9:73304158..73363098hg19UCSC Ensembl
Outerchr9:72493978..72552918hg18UCSC Ensembl
Outerchr9:70533712..70592652hg17UCSC Ensembl
Cytoband9q21.11
Allele length
AssemblyAllele length
hg3858941
hg1958941
hg1858941
hg1758941
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv9767, nssv808, nssv9471, nssv10672, nssv5161, nssv3725, nssv6280
SamplesNA18507, NA12156, NA12878, NA18956, NA18517, NA19240, NA19129
Known GenesTRPM3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv6556
Frequency
Sample Size9
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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