A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv6550



Internal ID15204785
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:69099228..69145132hg38UCSC Ensembl
Outerchr9:71714144..71760048hg19UCSC Ensembl
Outerchr9:70903964..70949868hg18UCSC Ensembl
Outerchr9:68943698..68989602hg17UCSC Ensembl
Cytoband9q21.11
Allele length
AssemblyAllele length
hg3845905
hg1945905
hg1845905
hg1745905
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv807, nssv3723, nssv6279, nssv1786, nssv5159, nssv10669
SamplesNA18956, NA19129, NA12156, NA12878, NA19240, NA18555
Known GenesFXN, TJP2
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv6550
Frequency
Sample Size9
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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