A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv6549694



Internal ID20922855
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:155298173..158468085hg38UCSC Ensembl
chr1:155267964..158437875hg19UCSC Ensembl
Cytoband1q22
Allele length
AssemblyAllele length
hg383169913
hg193169912
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv18247108
Samples
Known GenesAPOA1BP, ARHGEF11, ARHGEF2, ASH1L, ASH1L-AS1, BCAN, BGLAP, C1orf61, C1orf85, CCT3, CD1A, CD1B, CD1C, CD1D, CD1E, CD5L, CRABP2, CYCSP52, DAP3, ETV3, ETV3L, FCRL1, FCRL2, FCRL3, FCRL4, FCRL5, FDPS, GON4L, GPATCH4, HAPLN2, HDGF, INSRR, IQGAP3, ISG20L2, KIAA0907, KIRREL, LAMTOR2, LMNA, LOC646268, LRRC71, MEF2D, MEX3A, MIR555, MIR6738, MIR765, MIR7851, MIR9-1, MRPL24, MSTO1, MSTO2P, NES, NTRK1, OR10K1, OR10K2, OR10T2, PAQR6, PEAR1, PKLR, PMF1, PMF1-BGLAP, POU5F1P4, PRCC, RAB25, RHBG, RIT1, RRNAD1, RUSC1, RUSC1-AS1, RXFP4, SCARNA4, SEMA4A, SH2D2A, SLC25A44, SMG5, SNORA42, SSR2, SYT11, TMEM79, TSACC, TTC24, UBQLN4, VHLL, YY1AP1
MethodSequencing
Analysis
Platform
Comments
ReferenceSedlazeck_et_al_2020
Pubmed ID99999999
Accession Number(s)nsv6549694
Frequency
Sample Size19652
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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