A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv6540919



Internal ID20914206
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:9115607..13898149hg38UCSC Ensembl
chr3:9157291..13939646hg19UCSC Ensembl
Cytoband3p25.1
Allele length
AssemblyAllele length
hg384782543
hg194782356
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv18264072
Samples
Known GenesARPC4, ARPC4-TTLL3, ATG7, ATP2B2, BRK1, BRPF1, C3orf83, CAMK1, CAND2, CIDEC, CIDECP, CPNE9, CRELD1, EMC3, EMC3-AS1, FANCD2, FANCD2OS, FBLN2, GHRL, GHRLOS, HDAC11, HRH1, IL17RC, IL17RE, IQSEC1, IRAK2, JAGN1, LHFPL4, LINC00606, LINC00620, LINC00852, LOC401052, MIR885, MKRN2, MTMR14, NUP210, OGG1, PPARG, PRRT3, PRRT3-AS1, RAF1, RPL32, RPUSD3, SEC13, SETD5, SETD5-AS1, SLC6A1, SLC6A11, SLC6A1-AS1, SNORA7A, SRGAP3, SRGAP3-AS3, SYN2, TADA3, TAMM41, TATDN2, THUMPD3, TIMP4, TMEM40, TSEN2, TTLL3, VGLL4, VHL, WNT7A
MethodSequencing
Analysis
Platform
Comments
ReferenceSedlazeck_et_al_2020
Pubmed ID99999999
Accession Number(s)nsv6540919
Frequency
Sample Size19652
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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