A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602709



Internal ID16390118
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32625121..32811865hg38UCSC Ensembl
Innerchr6:32592898..32779642hg19UCSC Ensembl
Innerchr6:32700876..32887620hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38186745
hg19186745
hg18186745
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10586n54
Supporting Variantsnssv1056519, nssv1056528, nssv1056523, nssv1056524, nssv1056520, nssv1056521, nssv1056518, nssv1056525, nssv1056527, nssv1056526, nssv1056522
Samples
Known GenesHLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602709
Frequency
Sample Size17421
Observed Gain0
Observed Loss11
Observed Complex0
Frequencyn/a


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