A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602394



Internal ID16389803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32510377..32683279hg38UCSC Ensembl
Innerchr6:32478154..32651056hg19UCSC Ensembl
Innerchr6:32586132..32759034hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38172903
hg19172903
hg18172903
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10489n54
Supporting Variantsnssv1055379, nssv1055377, nssv1055376, nssv1055375, nssv1055374, nssv1055378
Samples
Known GenesHLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602394
Frequency
Sample Size17421
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer