A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602284



Internal ID16389693
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32491135..32811865hg38UCSC Ensembl
Innerchr6:32458912..32779642hg19UCSC Ensembl
Innerchr6:32566890..32887620hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38320731
hg19320731
hg18320731
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10490n54
Supporting Variantsnssv1054929, nssv1054943, nssv1054938, nssv1054937, nssv1054945, nssv1054936, nssv1054930, nssv1054934, nssv1054942, nssv1054933, nssv1054940, nssv1054939, nssv1054944, nssv1054931, nssv1054935, nssv1054932, nssv1054941
Samples
Known GenesHLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602284
Frequency
Sample Size17421
Observed Gain0
Observed Loss17
Observed Complex0
Frequencyn/a


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