A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602281



Internal ID16389690
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32491135..32666554hg38UCSC Ensembl
Innerchr6:32458912..32634331hg19UCSC Ensembl
Innerchr6:32566890..32742309hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38175420
hg19175420
hg18175420
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10489n54
Supporting Variantsnssv1054926, nssv1054925
Samples
Known GenesHLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602281
Frequency
Sample Size17421
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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