A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602280



Internal ID16389689
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32491135..32659936hg38UCSC Ensembl
Innerchr6:32458912..32627713hg19UCSC Ensembl
Innerchr6:32566890..32735691hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38168802
hg19168802
hg18168802
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10489n54
Supporting Variantsnssv1054924, nssv1054923
Samples
Known GenesHLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602280
Frequency
Sample Size17421
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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