A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602188



Internal ID16389597
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32487705..32812026hg38UCSC Ensembl
Innerchr6:32455482..32779803hg19UCSC Ensembl
Innerchr6:32563460..32887781hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38324322
hg19324322
hg18324322
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10490n54
Supporting Variantsnssv1054520, nssv1054525, nssv1054521, nssv1054523, nssv1054522, nssv1054519, nssv1054524
Samples
Known GenesHLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602188
Frequency
Sample Size17421
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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