A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602180



Internal ID16389589
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32487705..32584248hg38UCSC Ensembl
Innerchr6:32455482..32552025hg19UCSC Ensembl
Innerchr6:32563460..32660003hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3896544
hg1996544
hg1896544
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10506n54
Supporting Variantsnssv1054501, nssv1054504, nssv1054502, nssv1054503
Samples
Known GenesHLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602180
Frequency
Sample Size17421
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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