A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv602179



Internal ID16389588
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32487705..32580526hg38UCSC Ensembl
Innerchr6:32455482..32548303hg19UCSC Ensembl
Innerchr6:32563460..32656281hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3892822
hg1992822
hg1892822
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10506n54
Supporting Variantsnssv1054496, nssv1054500, nssv1054498, nssv1054499, nssv1054497
Samples
Known GenesHLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv602179
Frequency
Sample Size17421
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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