A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv602157

Internal ID

16389566

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr6:32487705..32516591	hg38	UCSC Ensembl
Inner	chr6:32455482..32484368	hg19	UCSC Ensembl
Inner	chr6:32563460..32592346	hg18	UCSC Ensembl

Cytoband

6p21.32

Allele length

Assembly	Allele length
hg38	28887
hg19	28887
hg18	28887

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv1054290, nssv1054099, nssv1054165, nssv1054158, nssv1054091, nssv1054056, nssv1054040, nssv1054024, nssv1054115, nssv1054000, nssv1054308, nssv1054233, nssv1054323, nssv1054182, nssv1054256, nssv1054104, nssv1054343, nssv1054332, nssv1054340, nssv1054149, nssv1054094, nssv1054153, nssv1053997, nssv1054222, nssv1054172, nssv1054028, nssv1054148, nssv1054298, nssv1054062, nssv1054309, nssv1054122, nssv1054267, nssv1054155, nssv1054230, nssv1054008, nssv1054205, nssv1054170, nssv1054330, nssv1054185, nssv1054159, nssv1054254, nssv1054162, nssv1054083, nssv1054236, nssv1054059, nssv1054095, nssv1054258, nssv1054311, nssv1054209, nssv1054027, nssv1054282, nssv1054103, nssv1054070, nssv1053990, nssv1054002, nssv1054302, nssv1054234, nssv1054006, nssv1054198, nssv1054157, nssv1054342, nssv1054318, nssv1054036, nssv1054218, nssv1054043, nssv1054247, nssv1054327, nssv1054273, nssv1054237, nssv1054316, nssv1054054, nssv1054137, nssv1054133, nssv1054333, nssv1054063, nssv1054269, nssv1054011, nssv1054138, nssv1054235, nssv1054228, nssv1054082, nssv1054114, nssv1054201, nssv1054345, nssv1054263, nssv1054193, nssv1054163, nssv1054306, nssv1054108, nssv1054174, nssv1054135, nssv1054335, nssv1054252, nssv1054175, nssv1054275, nssv1054251, nssv1054166, nssv1054014, nssv1054294, nssv1054071, nssv1054049, nssv1053993, nssv1054281, nssv1054292, nssv1054112, nssv1054100, nssv1054098, nssv1054151, nssv1054118, nssv1054189, nssv1054031, nssv1054296, nssv1054160, nssv1054057, nssv1054226, nssv1054086, nssv1054017, nssv1054248, nssv1054025, nssv1054255, nssv1054220, nssv1054047, nssv1054261, nssv1054250, nssv1054312, nssv1053991, nssv1054271, nssv1054089, nssv1054272, nssv1054077, nssv1054324, nssv1054210, nssv1054249, nssv1054075, nssv1054142, nssv1054022, nssv1054010, nssv1054052, nssv1054076, nssv1054129, nssv1054277, nssv1054034, nssv1054278, nssv1054045, nssv1054007, nssv1054068, nssv1054058, nssv1054279, nssv1054217, nssv1054197, nssv1054167, nssv1054304, nssv1054266, nssv1054219, nssv1054090, nssv1054239, nssv1054117, nssv1054038, nssv1054270, nssv1054128, nssv1054121, nssv1054097, nssv1054264, nssv1054169, nssv1054156, nssv1054016, nssv1054246, nssv1054013, nssv1054195, nssv1054080, nssv1054212, nssv1054229, nssv1054106, nssv1054194, nssv1054202, nssv1054315, nssv1054051, nssv1054178, nssv1054164, nssv1054240, nssv1054087, nssv1054026, nssv1054180, nssv1054144, nssv1054065, nssv1054334, nssv1054288, nssv1053998, nssv1054039, nssv1054123, nssv1054177, nssv1054243, nssv1054046, nssv1054291, nssv1054037, nssv1054224, nssv1054244, nssv1054050, nssv1054322, nssv1054173, nssv1054018, nssv1054069, nssv1054019, nssv1054042, nssv1054150, nssv1054168, nssv1054314, nssv1054241, nssv1054213, nssv1054109, nssv1053994, nssv1054238, nssv1054145, nssv1054341, nssv1054015, nssv1054319, nssv1054225, nssv1054216, nssv1054346, nssv1054130, nssv1054120, nssv1054072, nssv1054262, nssv1054338, nssv1054329, nssv1054227, nssv1054211, nssv1054276, nssv1053996, nssv1054131, nssv1054192, nssv1054125, nssv1054061, nssv1054048, nssv1054310, nssv1054092, nssv1054223, nssv1054146, nssv1054032, nssv1054289, nssv1054181, nssv1054127, nssv1054020, nssv1054326, nssv1054274, nssv1054283, nssv1054078, nssv1054257, nssv1054300, nssv1054297, nssv1054293, nssv1054260, nssv1054321, nssv1054299, nssv1054060, nssv1054176, nssv1054253, nssv1054305, nssv1054081, nssv1054320, nssv1054186, nssv1054053, nssv1053992, nssv1054093, nssv1054084, nssv1054301, nssv1054268, nssv1054190, nssv1054214, nssv1054124, nssv1054200, nssv1054196, nssv1054044, nssv1054317, nssv1054303, nssv1054187, nssv1054041, nssv1054004, nssv1054280, nssv1054055, nssv1054208, nssv1054206, nssv1054191, nssv1054111, nssv1054101, nssv1054009, nssv1054232, nssv1054110, nssv1054344, nssv1054325, nssv1053989, nssv1054284, nssv1054231, nssv1054035, nssv1054179, nssv1054147, nssv1054021, nssv1054088, nssv1054064, nssv1054287, nssv1054161, nssv1054119, nssv1054030, nssv1054203, nssv1054140, nssv1054136, nssv1054242, nssv1054085, nssv1054259, nssv1054033, nssv1054023, nssv1054134, nssv1054285, nssv1054339, nssv1054199, nssv1054313, nssv1054331, nssv1054286, nssv1054003, nssv1054079, nssv1054066, nssv1054336, nssv1054152, nssv1054204, nssv1054188, nssv1054116, nssv1054307, nssv1054001, nssv1054215, nssv1053999, nssv1054141, nssv1054074, nssv1054154, nssv1054245, nssv1054012, nssv1054295, nssv1054132, nssv1054265, nssv1054143, nssv1054073, nssv1054105, nssv1054171, nssv1054067, nssv1053995, nssv1054184, nssv1054107, nssv1054139, nssv1054096, nssv1054337, nssv1054328, nssv1054102, nssv1054029, nssv1054005, nssv1054207, nssv1054221, nssv1054183, nssv1054113, nssv1054126

Samples

Known Genes

Method

SNP array

Analysis

Illumina SNP array copy number analysis

Platform

Not reported

Comments

Reference

Cooper_et_al_2011

Pubmed ID

Accession Number(s)

Frequency

Sample Size	17421
Observed Gain	0
Observed Loss	358
Observed Complex	0
Frequency	n/a