A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv601875



Internal ID16042598
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:31387541..31483699hg38UCSC Ensembl
Innerchr6:31355318..31451476hg19UCSC Ensembl
Innerchr6:31463297..31559455hg18UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3896159
hg1996159
hg1896159
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10453n54
Supporting Variantsnssv1154259, nssv1053381, nssv1053385, nssv1053394, nssv1053382, nssv1053390, nssv1053383, nssv1053396, nssv1053392, nssv1154262, nssv1053388, nssv1053395, nssv1154265, nssv1154266, nssv1053386, nssv1154264, nssv1154263, nssv1154267, nssv1053391, nssv1154261, nssv1053397, nssv1053393, nssv1154260, nssv1053387, nssv1053384, nssv1053389
SamplesHGDP00445, HGDP01250, HGDP00120, HGDP01237, HGDP01203, HGDP01290, HGDP00762, HGDP00844, HGDP00927
Known GenesHCG26, HCP5, MICA
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv601875
Frequency
Sample Size17421
Observed Gain0
Observed Loss26
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer