A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv601314



Internal ID16042037
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29891740..29918387hg38UCSC Ensembl
Innerchr6:29859517..29886164hg19UCSC Ensembl
Innerchr6:29967496..29994143hg18UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3826648
hg1926648
hg1826648
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv10346n54
Supporting Variantsnssv1154057, nssv1051917, nssv1154048, nssv1153662, nssv1154069, nssv1051897, nssv1154053, nssv1051900, nssv1051893, nssv1154064, nssv1153671, nssv1051887, nssv1154063, nssv1154052, nssv1154058, nssv1153667, nssv1153640, nssv1153657, nssv1051923, nssv1153664, nssv1051896, nssv1051891, nssv1154076, nssv1154043, nssv1154041, nssv1051894, nssv1051915, nssv1154067, nssv1154055, nssv1154065, nssv1051914, nssv1153651, nssv1153637, nssv1153656, nssv1154046, nssv1153660, nssv1051901, nssv1051895, nssv1153647, nssv1153655, nssv1051884, nssv1051929, nssv1153653, nssv1154050, nssv1051927, nssv1153644, nssv1154054, nssv1153646, nssv1154062, nssv1051889, nssv1051909, nssv1154047, nssv1153670, nssv1153663, nssv1153638, nssv1154070, nssv1154074, nssv1051904, nssv1153648, nssv1153659, nssv1153661, nssv1051902, nssv1153652, nssv1154066, nssv1154059, nssv1153643, nssv1153636, nssv1051898, nssv1051928, nssv1051899, nssv1051920, nssv1051916, nssv1153642, nssv1051906, nssv1154042, nssv1153650, nssv1051925, nssv1154051, nssv1051892, nssv1154071, nssv1154060, nssv1153658, nssv1153669, nssv1051903, nssv1154075, nssv1153649, nssv1153665, nssv1051926, nssv1051888, nssv1153645, nssv1051886, nssv1051924, nssv1051912, nssv1154045, nssv1051921, nssv1051918, nssv1051905, nssv1154044, nssv1051910, nssv1154061, nssv1153641, nssv1051911, nssv1051908, nssv1051907, nssv1154049, nssv1153666, nssv1154072, nssv1153668, nssv1154068, nssv1051919, nssv1051913, nssv1154056, nssv1051922, nssv1153654, nssv1051885, nssv1153639, nssv1051890, nssv1154073
SamplesHGDP00835, HGDP01208, HGDP00833, HGDP01210, HGDP00491, HGDP00003, HGDP00851, HGDP01250, HGDP00772, HGDP01182, HGDP00837, HGDP00750, HGDP00189, HGDP00850, HGDP00548, HGDP00806, 1780862384_A, 1780854573_A, HGDP01211, HGDP00553, HGDP00787, HGDP00766, 1780862590_A, HGDP01263, HGDP00760, HGDP01054, HGDP00547, HGDP01205, HGDP00834, HGDP00680, HGDP01239, HGDP00845, HGDP00954, HGDP00094, HGDP00658, HGDP01203, HGDP00840, HGDP01181, HGDP00655, HGDP00556, HGDP00588, HGDP00035, HGDP00747, HGDP00839, HGDP00546, HGDP00903, HGDP01099, HGDP00841, HGDP00662, HGDP00978, HGDP00540, HGDP00634, HGDP00769, HGDP00561, HGDP00234, HGDP01255, HGDP00868, HGDP00574, HGDP00490, HGDP00818, HGDP00656, HGDP01228, HGDP00131, HGDP01027, HGDP01042, HGDP00606, HGDP00825, HGDP00663, HGDP01206, HGDP01015, HGDP00838, HGDP00859
Known Genes
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv601314
Frequency
Sample Size17421
Observed Gain0
Observed Loss118
Observed Complex0
Frequencyn/a


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