A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv601264



Internal ID16041987
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29883666..31320716hg38UCSC Ensembl
Innerchr6:29851443..31288493hg19UCSC Ensembl
Innerchr6:29959422..31396472hg18UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg381437051
hg191437051
hg181437051
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1051800
Samples
Known GenesABCF1, ATAT1, C6orf136, C6orf15, CCHCR1, CDSN, DDR1, DHX16, DPCR1, FLOT1, GNL1, GTF2H4, HCG17, HCG18, HCG22, HCG27, HCG4B, HCG8, HCG9, HLA-A, HLA-C, HLA-E, HLA-H, HLA-J, HLA-L, IER3, MDC1, MIR4640, MIR6891, MIR877, MRPS18B, MUC21, MUC22, NRM, POU5F1, PPP1R10, PPP1R11, PPP1R18, PRR3, PSORS1C1, PSORS1C2, PSORS1C3, RNF39, RPP21, SFTA2, TCF19, TRIM10, TRIM15, TRIM26, TRIM31, TRIM39, TRIM39-RPP21, TRIM40, TUBB, VARS2, ZNRD1, ZNRD1-AS1
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv601264
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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