A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv598448



Internal ID16039171
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:69539429..69973885hg38UCSC Ensembl
Innerchr5:68835256..69269712hg19UCSC Ensembl
Innerchr5:68871012..69305468hg18UCSC Ensembl
Cytoband5q13.2
Allele length
AssemblyAllele length
hg38434457
hg19434457
hg18434457
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1034685
Samples
Known GenesGTF2H2, GTF2H2B, GTF2H2C, GTF2H2D, GUSBP3, GUSBP9, LOC100272216, LOC647859, OCLN, SMA4
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv598448
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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