A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv597895

Internal ID

16038618

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr5:42628506..42630866	hg38	UCSC Ensembl
Inner	chr5:42628608..42630968	hg19	UCSC Ensembl
Inner	chr5:42664365..42666725	hg18	UCSC Ensembl

Cytoband

5p12

Allele length

Assembly	Allele length
hg38	2361
hg19	2361
hg18	2361

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv1029285, nssv1029284, nssv1029187, nssv1029279, nssv1029312, nssv1029272, nssv1029269, nssv1029257, nssv1029196, nssv1029249, nssv1029276, nssv1029168, nssv1029245, nssv1029263, nssv1029275, nssv1029163, nssv1029201, nssv1029277, nssv1029254, nssv1029288, nssv1029171, nssv1029302, nssv1029256, nssv1029246, nssv1029251, nssv1029228, nssv1029202, nssv1029214, nssv1029195, nssv1029172, nssv1029206, nssv1029295, nssv1029268, nssv1029178, nssv1029231, nssv1029165, nssv1029327, nssv1029226, nssv1029204, nssv1029240, nssv1029166, nssv1029274, nssv1029308, nssv1029267, nssv1029230, nssv1029321, nssv1029325, nssv1029317, nssv1029212, nssv1029200, nssv1029175, nssv1029221, nssv1029217, nssv1029185, nssv1029170, nssv1029324, nssv1029229, nssv1029180, nssv1029297, nssv1029162, nssv1029314, nssv1029223, nssv1029205, nssv1029300, nssv1029183, nssv1029320, nssv1029219, nssv1029222, nssv1029184, nssv1029318, nssv1029262, nssv1029260, nssv1029194, nssv1029181, nssv1029282, nssv1029190, nssv1029266, nssv1029310, nssv1029309, nssv1029290, nssv1029281, nssv1029250, nssv1029322, nssv1029315, nssv1029298, nssv1029299, nssv1029271, nssv1029307, nssv1029258, nssv1029234, nssv1029177, nssv1029208, nssv1029278, nssv1029296, nssv1029247, nssv1029173, nssv1029286, nssv1029239, nssv1029182, nssv1029176, nssv1029174, nssv1029236, nssv1029227, nssv1029305, nssv1029225, nssv1029218, nssv1029233, nssv1029199, nssv1029161, nssv1029313, nssv1029242, nssv1029283, nssv1029216, nssv1029198, nssv1029188, nssv1029169, nssv1029319, nssv1029224, nssv1029179, nssv1029259, nssv1029248, nssv1029211, nssv1029316, nssv1029280, nssv1029232, nssv1029311, nssv1029264, nssv1029291, nssv1029323, nssv1029210, nssv1029191, nssv1029192, nssv1029189, nssv1029265, nssv1029252, nssv1029167, nssv1029255, nssv1029186, nssv1029261, nssv1029193, nssv1029215, nssv1029306, nssv1029289, nssv1029273, nssv1029287, nssv1029237, nssv1029294, nssv1029238, nssv1029203, nssv1029253, nssv1029270, nssv1029235, nssv1029303, nssv1029292, nssv1029293, nssv1029243, nssv1029220, nssv1029207, nssv1029244, nssv1029209, nssv1029304, nssv1029164, nssv1029326, nssv1029301, nssv1029197, nssv1029241, nssv1029213

Samples

Known Genes

Method

SNP array

Analysis

Illumina SNP array copy number analysis

Platform

Not reported

Comments

Reference

Cooper_et_al_2011

Pubmed ID

Accession Number(s)

Frequency

Sample Size	17421
Observed Gain	0
Observed Loss	167
Observed Complex	0
Frequency	n/a