A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv592641

Internal ID

16033364

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr3:178832458..178832742	hg38	UCSC Ensembl
Inner	chr3:178550246..178550530	hg19	UCSC Ensembl
Inner	chr3:180032940..180033224	hg18	UCSC Ensembl

Cytoband

3q26.32

Allele length

Assembly	Allele length
hg38	285
hg19	285
hg18	285

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv982010, nssv982117, nssv981990, nssv982179, nssv981969, nssv981981, nssv982004, nssv981965, nssv982219, nssv982208, nssv982037, nssv981867, nssv982152, nssv981862, nssv982177, nssv982182, nssv981858, nssv981901, nssv981909, nssv981834, nssv981912, nssv981914, nssv981967, nssv982218, nssv982136, nssv982112, nssv981822, nssv981921, nssv982034, nssv982129, nssv981890, nssv982130, nssv982027, nssv981902, nssv982046, nssv981861, nssv982176, nssv981823, nssv981826, nssv981968, nssv982067, nssv982104, nssv982186, nssv982024, nssv981848, nssv982029, nssv982114, nssv982144, nssv982171, nssv982056, nssv981850, nssv982131, nssv981944, nssv982007, nssv981885, nssv981835, nssv981925, nssv982041, nssv982110, nssv982139, nssv982200, nssv981828, nssv982148, nssv981970, nssv982016, nssv981840, nssv982023, nssv982068, nssv981836, nssv981963, nssv982210, nssv982116, nssv982169, nssv981988, nssv981975, nssv982081, nssv981839, nssv981852, nssv981916, nssv981936, nssv982013, nssv982193, nssv981842, nssv981962, nssv982180, nssv981855, nssv981895, nssv982153, nssv981913, nssv982122, nssv981939, nssv982185, nssv981961, nssv982025, nssv981860, nssv981958, nssv981964, nssv982111, nssv982134, nssv981827, nssv981928, nssv981992, nssv982005, nssv982108, nssv981907, nssv981935, nssv981887, nssv981923, nssv981889, nssv981919, nssv982124, nssv982040, nssv982101, nssv982058, nssv982089, nssv982097, nssv982173, nssv982174, nssv982099, nssv982189, nssv982161, nssv981979, nssv982154, nssv982157, nssv981933, nssv982194, nssv982190, nssv982086, nssv981879, nssv982195, nssv981996, nssv982150, nssv982001, nssv982018, nssv982168, nssv981818, nssv981910, nssv981986, nssv981876, nssv982049, nssv982206, nssv981904, nssv982123, nssv982146, nssv982201, nssv982217, nssv982030, nssv981998, nssv982033, nssv982043, nssv981872, nssv981863, nssv982080, nssv981918, nssv982198, nssv981856, nssv981877, nssv981869, nssv981905, nssv982011, nssv982220, nssv982059, nssv982105, nssv982191, nssv981931, nssv982035, nssv981864, nssv981880, nssv981829, nssv982175, nssv981830, nssv981929, nssv982057, nssv982149, nssv982214, nssv981825, nssv982055, nssv982127, nssv982181, nssv981922, nssv982053, nssv981940, nssv981884, nssv981894, nssv982143, nssv981951, nssv981882, nssv981886, nssv982119, nssv982088, nssv981817, nssv981900, nssv982142, nssv982216, nssv981853, nssv981934, nssv982118, nssv981937, nssv981841, nssv981993, nssv982160, nssv982209, nssv981971, nssv982178, nssv982199, nssv981953, nssv981991, nssv982045, nssv982192, nssv981938, nssv981851, nssv982000, nssv982094, nssv982183, nssv981960, nssv981837, nssv982022, nssv982039, nssv982184, nssv982051, nssv981897, nssv982075, nssv981924, nssv982006, nssv982107, nssv982128, nssv981899, nssv982073, nssv982159, nssv982009, nssv982015, nssv981878, nssv982038, nssv982166, nssv981891, nssv981814, nssv981892, nssv982135, nssv981957, nssv981995, nssv982052, nssv981821, nssv981866, nssv982096, nssv982121, nssv981873, nssv981984, nssv981999, nssv982050, nssv982002, nssv981956, nssv981865, nssv981881, nssv981994, nssv981978, nssv982072, nssv982165, nssv981974, nssv981982, nssv982069, nssv981972, nssv981980, nssv982042, nssv982215, nssv982078, nssv981927, nssv981950, nssv982084, nssv982125, nssv982170, nssv981954, nssv982019, nssv982093, nssv982126, nssv982031, nssv982087, nssv981849, nssv982020, nssv982115, nssv982163, nssv981930, nssv982162, nssv982205, nssv982036, nssv982095, nssv982106, nssv982196, nssv982147, nssv982145, nssv982204, nssv982151, nssv981844, nssv982120, nssv981941, nssv981820, nssv982008, nssv982070, nssv982137, nssv982172, nssv981943, nssv982065, nssv982109, nssv982079, nssv982203, nssv982076, nssv982132, nssv981854, nssv981952, nssv982014, nssv981948, nssv981819, nssv982047, nssv982141, nssv981973, nssv982060, nssv982211, nssv982155, nssv982187, nssv981896, nssv982156, nssv981977, nssv981997, nssv982082, nssv981870, nssv982100, nssv981832, nssv981859, nssv981888, nssv982021, nssv982212, nssv981976, nssv981906, nssv981917, nssv982167, nssv981983, nssv982090, nssv982074, nssv981942, nssv982064, nssv982133, nssv981949, nssv982028, nssv981846, nssv982140, nssv981833, nssv981883, nssv981898, nssv982003, nssv982063, nssv981915, nssv981966, nssv981926, nssv982066, nssv981871, nssv981989, nssv982032, nssv981932, nssv982044, nssv981843, nssv981908, nssv982061, nssv982098, nssv982102, nssv982071, nssv981847, nssv981903, nssv981911, nssv981955, nssv982017, nssv982077, nssv982054, nssv982103, nssv982197, nssv982012, nssv981920, nssv981831, nssv982207, nssv981874, nssv981893, nssv982048, nssv981815, nssv981947, nssv982083, nssv982158, nssv981946, nssv982091, nssv981813, nssv982164, nssv982113, nssv981816, nssv981868, nssv981824, nssv981857, nssv981875, nssv981945, nssv982062, nssv982202, nssv982213, nssv982085, nssv981838, nssv982188, nssv981985, nssv982026, nssv981987, nssv981959, nssv982138, nssv982092, nssv981845

Samples

Known Genes

Method

SNP array

Analysis

Illumina SNP array copy number analysis

Platform

Not reported

Comments

Reference

Cooper_et_al_2011

Pubmed ID

Accession Number(s)

Frequency

Sample Size	17421
Observed Gain	0
Observed Loss	408
Observed Complex	0
Frequency	n/a