A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5904127



Internal ID22679302
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:9996659..11875087hg38UCSC Ensembl
chr3:10038343..11916561hg19UCSC Ensembl
Cytoband3p25.2
Allele length
AssemblyAllele length
hg381878429
hg191878219
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1448n209
Supporting Variantsnssv17427681
Samples
Known GenesATG7, ATP2B2, BRK1, CIDECP, EMC3-AS1, FANCD2, FANCD2OS, GHRL, GHRLOS, HRH1, IRAK2, LINC00606, LINC00852, LOC401052, MIR885, SEC13, SLC6A1, SLC6A11, SLC6A1-AS1, TAMM41, TATDN2, VGLL4, VHL
MethodSequencing
Analysis
Platform
Comments
ReferenceAlmarri_et_al_2020
Pubmed ID32531199
Accession Number(s)nsv5904127
Frequency
Sample Size914
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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