A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5887



Internal ID15550741
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:104760803..104851157hg38UCSC Ensembl
Outerchr7:104401250..104491604hg19UCSC Ensembl
Outerchr7:104188486..104278840hg18UCSC Ensembl
Outerchr7:103995201..104085555hg17UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg3890355
hg1990355
hg1890355
hg1790355
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv8412, nssv672, nssv9724
SamplesNA18507, NA12156, NA19240
Known GenesLHFPL3, LHFPL3-AS1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5887
Frequency
Sample Size9
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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