A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv588401



Internal ID16029124
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:22326954..22897847hg38UCSC Ensembl
Innerchr22:22681312..23240027hg19UCSC Ensembl
Innerchr22:21011312..21570027hg18UCSC Ensembl
Cytoband22q11.22
Allele length
AssemblyAllele length
hg38570894
hg19558716
hg18558716
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv8005n54
Supporting Variantsnssv1151517, nssv1151516, nssv1151518, nssv1151519, nssv1151515
SamplesHGDP00267, HGDP00772, HGDP00476, HGDP01021, HGDP00527
Known GenesGGTLC2, IGLL5, LOC648691, MIR650, POM121L1P, PRAME, ZNF280A, ZNF280B
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv588401
Frequency
Sample Size17421
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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