A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv585255

Internal ID

16372664

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr20:1591728..1611843	hg38	UCSC Ensembl
Inner	chr20:1572374..1592489	hg19	UCSC Ensembl
Inner	chr20:1520374..1540489	hg18	UCSC Ensembl

Cytoband

20p13

Allele length

Assembly	Allele length
hg38	20116
hg19	20116
hg18	20116

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv937219, nssv937065, nssv936969, nssv936941, nssv937200, nssv936998, nssv937139, nssv937031, nssv937106, nssv936988, nssv936976, nssv937067, nssv937151, nssv937038, nssv937004, nssv937125, nssv937025, nssv937128, nssv937110, nssv936947, nssv936991, nssv937096, nssv937034, nssv936943, nssv937170, nssv937091, nssv937058, nssv937076, nssv936982, nssv937129, nssv937099, nssv937197, nssv937164, nssv936968, nssv937083, nssv937075, nssv937057, nssv936957, nssv937222, nssv937216, nssv937157, nssv937086, nssv937077, nssv937145, nssv937079, nssv937184, nssv937225, nssv937181, nssv937042, nssv937196, nssv937043, nssv937155, nssv937103, nssv937206, nssv937183, nssv937011, nssv937138, nssv937095, nssv936997, nssv937071, nssv936974, nssv937117, nssv937036, nssv937178, nssv937212, nssv937124, nssv937192, nssv937085, nssv937218, nssv937179, nssv937154, nssv936948, nssv937175, nssv937226, nssv937059, nssv937044, nssv937173, nssv937202, nssv936973, nssv936945, nssv937133, nssv937053, nssv937047, nssv937022, nssv937149, nssv937113, nssv937002, nssv937189, nssv937160, nssv937045, nssv936996, nssv937123, nssv937115, nssv937208, nssv937107, nssv937007, nssv936946, nssv937068, nssv936989, nssv936955, nssv937111, nssv936977, nssv937046, nssv937146, nssv937018, nssv937207, nssv937055, nssv937148, nssv937203, nssv937072, nssv937109, nssv936956, nssv937080, nssv937098, nssv937088, nssv937100, nssv937021, nssv936950, nssv937105, nssv937040, nssv937186, nssv937131, nssv937169, nssv937032, nssv937005, nssv937118, nssv937035, nssv937017, nssv936964, nssv937026, nssv936961, nssv937228, nssv937126, nssv937144, nssv936999, nssv937150, nssv937003, nssv937054, nssv937227, nssv937084, nssv937000, nssv937114, nssv936985, nssv937141, nssv936994, nssv937193, nssv937182, nssv937135, nssv937102, nssv937168, nssv937092, nssv937166, nssv937070, nssv937069, nssv937199, nssv937215, nssv937185, nssv936981, nssv936954, nssv937015, nssv936980, nssv937013, nssv937012, nssv936944, nssv936986, nssv937190, nssv937214, nssv937062, nssv937153, nssv937180, nssv937121, nssv937094, nssv937060, nssv936993, nssv937093, nssv937019, nssv937030, nssv937048, nssv936995, nssv937213, nssv937161, nssv937014, nssv937210, nssv937008, nssv937016, nssv936942, nssv937066, nssv937165, nssv936960, nssv937217, nssv937176, nssv937097, nssv937039, nssv937130, nssv937205, nssv937163, nssv937041, nssv937142, nssv937221, nssv937081, nssv937073, nssv936951, nssv936990, nssv937191, nssv937122, nssv937063, nssv937078, nssv937120, nssv936959, nssv937159, nssv937010, nssv937195, nssv937167, nssv936966, nssv937132, nssv937064, nssv936970, nssv937156, nssv936987, nssv937001, nssv936963, nssv937127, nssv936978, nssv936992, nssv937187, nssv937224, nssv937006, nssv937037, nssv937223, nssv936952, nssv936972, nssv937209, nssv937009, nssv937028, nssv936958, nssv937171, nssv937162, nssv937104, nssv936984, nssv936983, nssv937020, nssv937090, nssv937052, nssv936967, nssv937056, nssv937051, nssv937027, nssv937211, nssv937152, nssv937201, nssv937177, nssv937204, nssv937188, nssv936971, nssv937119, nssv936975, nssv937112, nssv936949, nssv936979, nssv937158, nssv936965, nssv937024, nssv936953, nssv937140, nssv937061, nssv937050, nssv937087, nssv937220, nssv937174, nssv937172, nssv937116, nssv937134, nssv937136, nssv937194, nssv937101, nssv937029, nssv937033, nssv937089, nssv937074, nssv936940, nssv937147, nssv937143, nssv937049, nssv936962, nssv937108, nssv937198, nssv937023, nssv937137, nssv937082

Samples

Known Genes

Method

SNP array

Analysis

Illumina SNP array copy number analysis

Platform

Not reported

Comments

Reference

Cooper_et_al_2011

Pubmed ID

Accession Number(s)

Frequency

Sample Size	17421
Observed Gain	0
Observed Loss	289
Observed Complex	0
Frequency	n/a