A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5687



Internal ID15203835
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:6495247..6514789hg38UCSC Ensembl
Outerchr10:6537209..6556751hg19UCSC Ensembl
Outerchr10:6577215..6596757hg18UCSC Ensembl
Outerchr10:6577215..6596757hg17UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg3819543
hg1919543
hg1819543
hg1719543
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv8413
SamplesNA12156
Known GenesPRKCQ
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5687
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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