A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5676



Internal ID15550509
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:6339238..6386988hg38UCSC Ensembl
Outerchr10:6381200..6428950hg19UCSC Ensembl
Outerchr10:6421206..6468956hg18UCSC Ensembl
Outerchr10:6421206..6468956hg17UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg3847751
hg1947751
hg1847751
hg1747751
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1862, nssv9925, nssv6278, nssv5171, nssv11235, nssv3863, nssv732
SamplesNA18507, NA12156, NA12878, NA15510, NA18555, NA19240, NA19129
Known Genes
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5676
Frequency
Sample Size9
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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