A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5654



Internal ID15203799
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:5826402..5888671hg38UCSC Ensembl
Outerchr10:5868365..5930634hg19UCSC Ensembl
Outerchr10:5908371..5970640hg18UCSC Ensembl
Outerchr10:5908371..5970640hg17UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg3862270
hg1962270
hg1862270
hg1762270
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3860, nssv6272
SamplesNA12156, NA12878
Known GenesANKRD16
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5654
Frequency
Sample Size9
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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