A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv560186



Internal ID16000909
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:111538972..111541256hg38UCSC Ensembl
Innerchr12:111976776..111979060hg19UCSC Ensembl
Innerchr12:110461159..110463443hg18UCSC Ensembl
Cytoband12q24.12
Allele length
AssemblyAllele length
hg382285
hg192285
hg182285
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv2869n54
Supporting Variantsnssv802104, nssv802110, nssv802088, nssv802132, nssv802095, nssv802076, nssv802126, nssv802130, nssv802137, nssv802117, nssv802078, nssv802121, nssv802093, nssv802103, nssv802097, nssv802115, nssv802114, nssv802096, nssv802133, nssv802102, nssv802101, nssv802083, nssv802092, nssv802099, nssv802123, nssv802109, nssv802079, nssv802081, nssv802085, nssv802131, nssv802075, nssv802080, nssv802090, nssv802125, nssv802072, nssv802084, nssv802073, nssv802074, nssv802122, nssv802138, nssv802086, nssv802111, nssv802124, nssv802140, nssv802120, nssv802142, nssv802129, nssv802107, nssv802144, nssv802139, nssv802128, nssv802106, nssv802145, nssv802105, nssv802113, nssv802100, nssv802077, nssv802082, nssv802134, nssv802108, nssv802118, nssv802089, nssv802127, nssv802143, nssv802112, nssv802141, nssv802094, nssv802091, nssv802116, nssv802098, nssv802087, nssv802135, nssv802119, nssv802136
Samples
Known GenesATXN2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv560186
Frequency
Sample Size17421
Observed Gain0
Observed Loss74
Observed Complex0
Frequencyn/a


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