A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5586



Internal ID15203724
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:165280959..165333728hg38UCSC Ensembl
Outerchr6:165694448..165747217hg19UCSC Ensembl
Outerchr6:165614438..165667207hg18UCSC Ensembl
Outerchr6:165664859..165717628hg17UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg3852770
hg1952770
hg1852770
hg1752770
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2629, nssv3488, nssv600, nssv9436, nssv9702, nssv4954
SamplesNA18507, NA12878, NA18555, NA18517, NA19240, NA19129
Known GenesC6orf118, PDE10A
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5586
Frequency
Sample Size9
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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