A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv554902



Internal ID15995625
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:55603545..55693312hg38UCSC Ensembl
Innerchr11:55371021..55460788hg19UCSC Ensembl
Innerchr11:55127597..55217364hg18UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg3889768
hg1989768
hg1889768
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1906n54
Supporting Variantsnssv776513, nssv1175366, nssv776511, nssv1175379, nssv1175374, nssv1175370, nssv1175371, nssv1175368, nssv1175375, nssv776515, nssv776512, nssv1175369, nssv1175373, nssv1175367, nssv776507, nssv776514, nssv1175376, nssv1175377, nssv776508, nssv776510, nssv776509, nssv1175378, nssv1175365, nssv1175372
SamplesNINDS_116, NINDS_257, 1798860371_A, 1782681144_A, HGDP00226, HGDP01241, 1780862415_A, HGDP00057, HGDP00674, HGDP00532, HGDP00082, 1780862261_A, HGDP01302, HGDP00552, HGDP01201
Known GenesOR4C11, OR4C6, OR4P4, OR4S2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv554902
Frequency
Sample Size17421
Observed Gain2
Observed Loss22
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer