A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv554901



Internal ID15995624
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:55603545..55692619hg38UCSC Ensembl
Innerchr11:55371021..55460095hg19UCSC Ensembl
Innerchr11:55127597..55216671hg18UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg3889075
hg1989075
hg1889075
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1906n54
Supporting Variantsnssv1175352, nssv776500, nssv1175345, nssv1175363, nssv1175351, nssv776505, nssv1175343, nssv776486, nssv1175348, nssv1175350, nssv1175357, nssv776488, nssv1175360, nssv776496, nssv1175349, nssv776490, nssv1175336, nssv776493, nssv1175359, nssv1175358, nssv1175353, nssv776501, nssv776481, nssv776485, nssv776484, nssv1175335, nssv1175337, nssv1175364, nssv776495, nssv776506, nssv1175354, nssv776492, nssv1175356, nssv776483, nssv1175340, nssv1175344, nssv1175338, nssv776497, nssv776489, nssv1175339, nssv1175362, nssv1175346, nssv1175341, nssv776494, nssv776482, nssv1175355, nssv1175361, nssv776503, nssv776502, nssv776487, nssv776498, nssv776504, nssv776499, nssv1175347, nssv1175342, nssv776491
SamplesHGDP00143, HGDP00908, 1782681210_A, HGDP01047, HGDP00210, HGDP01238, HGDP00537, 1780854100_A, HGDP00617, HGDP00525, 1782681378_A, NINDS_162, HGDP00820, HGDP00775, NINDS_42, NINDS_31, HGDP00587, HGDP01345, HGDP01331, HGDP01359, HGDP01318, HGDP00909, HGDP00157, 1780854533_A, HGDP00643, HGDP01322, NINDS_131, 1780862394_A, HGDP00564, HGDP01282
Known GenesOR4C11, OR4C6, OR4P4, OR4S2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv554901
Frequency
Sample Size17421
Observed Gain5
Observed Loss51
Observed Complex0
Frequencyn/a


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