A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv554895



Internal ID15995618
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:55603545..55674892hg38UCSC Ensembl
Innerchr11:55371021..55442368hg19UCSC Ensembl
Innerchr11:55127597..55198944hg18UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg3871348
hg1971348
hg1871348
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1915n54
Supporting Variantsnssv1175156, nssv1175101, nssv1175165, nssv1175132, nssv1175187, nssv1175095, nssv1175154, nssv1175162, nssv1175123, nssv1175175, nssv1175110, nssv1175174, nssv1175122, nssv1175131, nssv1175116, nssv1175184, nssv1175098, nssv1175146, nssv1175138, nssv1175160, nssv1175144, nssv776023, nssv1175115, nssv1175111, nssv1175167, nssv1175094, nssv1175177, nssv1175183, nssv1175178, nssv1175136, nssv1175118, nssv1175109, nssv1175126, nssv1175124, nssv1175155, nssv1175157, nssv1175191, nssv776022, nssv1175121, nssv1175093, nssv1175119, nssv1175159, nssv1175141, nssv1175161, nssv1175107, nssv1175134, nssv1175129, nssv1175149, nssv1175143, nssv1175142, nssv1175176, nssv1175192, nssv1175182, nssv1175169, nssv1175188, nssv776020, nssv1175137, nssv1175127, nssv1175180, nssv1175097, nssv1175152, nssv1175164, nssv1175179, nssv1175171, nssv1175114, nssv1175189, nssv1175108, nssv1175106, nssv1175185, nssv1175145, nssv1175147, nssv1175190, nssv1175153, nssv1175139, nssv1175150, nssv776021, nssv1175103, nssv1175163, nssv1175100, nssv1175099, nssv1175096, nssv1175158, nssv1175173, nssv1175117, nssv1175172, nssv1175128, nssv1175125, nssv1175105, nssv1175113, nssv1175104, nssv1175102, nssv1175186, nssv1175148, nssv1175130, nssv1175120, nssv1175170, nssv1175140, nssv1175133, nssv1175112, nssv1175166, nssv1175135, nssv1175181, nssv1175168, nssv1175151
SamplesHGDP01209, HGDP00997, HGDP01208, NINDS_163, HGDP00958, HGDP01212, HGDP00277, HGDP00621, HGDP00445, HGDP00315, HGDP01234, HGDP00627, HGDP01231, HGDP00995, HGDP00195, HGDP00814, HGDP00113, HGDP01281, HGDP00772, HGDP00088, 1780854257_A, HGDP01384, HGDP00258, HGDP01191, HGDP00755, HGDP00631, HGDP01010, HGDP00140, HGDP00679, HGDP01004, HGDP01049, HGDP00136, HGDP01274, HGDP00286, HGDP01048, HGDP00066, HGDP01040, HGDP00959, HGDP00760, HGDP01287, HGDP01037, HGDP00891, HGDP00150, HGDP00526, HGDP00952, HGDP01279, HGDP00633, HGDP01268, HGDP00848, HGDP00112, HGDP00522, HGDP01096, HGDP00778, HGDP01320, HGDP00980, HGDP00237, HGDP01338, 1780862416_A, HGDP00747, HGDP01012, HGDP00761, HGDP01273, HGDP00438, HGDP00676, 1780862160_A, HGDP00121, HGDP01307, HGDP00928, HGDP01362, HGDP01099, NINDS_65, HGDP01097, HGDP01198, HGDP00351, HGDP00309, HGDP00886, HGDP00793, HGDP01319, HGDP01400, HGDP00158, HGDP01351, HGDP01374, HGDP01077, HGDP01179, HGDP00877, HGDP01327, HGDP01157, HGDP01226, HGDP00736, HGDP01180, HGDP00239, HGDP00319, HGDP00819, HGDP00336, HGDP00876, HGDP01011, HGDP00155, HGDP00914, HGDP00544, HGDP00616
Known GenesOR4C11, OR4C6, OR4P4, OR4S2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nsv554895
Frequency
Sample Size17421
Observed Gain9
Observed Loss95
Observed Complex0
Frequencyn/a


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