A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv554834

Internal ID

15995557

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr11:55600413..55685447	hg38	UCSC Ensembl
Inner	chr11:55367889..55452923	hg19	UCSC Ensembl
Inner	chr11:55124465..55209499	hg18	UCSC Ensembl

Cytoband

11q11

Allele length

Assembly	Allele length
hg38	85035
hg19	85035
hg18	85035

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv775367, nssv775511, nssv775359, nssv775489, nssv775373, nssv775422, nssv775528, nssv775573, nssv775554, nssv775605, nssv775403, nssv775534, nssv775374, nssv775492, nssv775552, nssv775454, nssv775486, nssv775408, nssv775432, nssv775473, nssv775604, nssv775399, nssv775379, nssv775447, nssv775361, nssv775342, nssv775455, nssv775410, nssv775499, nssv775556, nssv775466, nssv775590, nssv775400, nssv775375, nssv775352, nssv775401, nssv775493, nssv775500, nssv775538, nssv775530, nssv775608, nssv775488, nssv775559, nssv775547, nssv775372, nssv775354, nssv775437, nssv775601, nssv775597, nssv775481, nssv775445, nssv775436, nssv775593, nssv775546, nssv775532, nssv775512, nssv775477, nssv775469, nssv775574, nssv775497, nssv775565, nssv775465, nssv775579, nssv775414, nssv775349, nssv775515, nssv775603, nssv775441, nssv775570, nssv775470, nssv775347, nssv775560, nssv775484, nssv775557, nssv775502, nssv775458, nssv775588, nssv775411, nssv775612, nssv775439, nssv775338, nssv775595, nssv775525, nssv775503, nssv775442, nssv775450, nssv775542, nssv775535, nssv775419, nssv775522, nssv775357, nssv775474, nssv775526, nssv775339, nssv775395, nssv775413, nssv775495, nssv775428, nssv775607, nssv775509, nssv775461, nssv775468, nssv775536, nssv775581, nssv775440, nssv775551, nssv775386, nssv775363, nssv775464, nssv775397, nssv775549, nssv775417, nssv775391, nssv775431, nssv775478, nssv775341, nssv775544, nssv775348, nssv775487, nssv775577, nssv775508, nssv775519, nssv775362, nssv775394, nssv775457, nssv775537, nssv775494, nssv775548, nssv775453, nssv775524, nssv775370, nssv775416, nssv775356, nssv775336, nssv775384, nssv775398, nssv775425, nssv775462, nssv775596, nssv775541, nssv775572, nssv775351, nssv775527, nssv775429, nssv775558, nssv775449, nssv775611, nssv775505, nssv775513, nssv775613, nssv775426, nssv775479, nssv775480, nssv775382, nssv775550, nssv775587, nssv775407, nssv775483, nssv775496, nssv775598, nssv775521, nssv775543, nssv775415, nssv775377, nssv775368, nssv775569, nssv775380, nssv775594, nssv775591, nssv775583, nssv775520, nssv775371, nssv775405, nssv775385, nssv775510, nssv775467, nssv775456, nssv775592, nssv775459, nssv775609, nssv775358, nssv775561, nssv775578, nssv775533, nssv775491, nssv775507, nssv775387, nssv775430, nssv775463, nssv775402, nssv775443, nssv775435, nssv775421, nssv775340, nssv775506, nssv775444, nssv775434, nssv775568, nssv775476, nssv775472, nssv775606, nssv775350, nssv775501, nssv775585, nssv775582, nssv775571, nssv775523, nssv775343, nssv775446, nssv775555, nssv775388, nssv775383, nssv775566, nssv775540, nssv775563, nssv775448, nssv775514, nssv775567, nssv775485, nssv775381, nssv775369, nssv775602, nssv775600, nssv775365, nssv775504, nssv775564, nssv775393, nssv775418, nssv775580, nssv775498, nssv775344, nssv775531, nssv775423, nssv775378, nssv775427, nssv775586, nssv775451, nssv775575, nssv775562, nssv775584, nssv775475, nssv775376, nssv775553, nssv775539, nssv775392, nssv775438, nssv775409, nssv775337, nssv775490, nssv775420, nssv775390, nssv775345, nssv775545, nssv775529, nssv775389, nssv775599, nssv775396, nssv775452, nssv775518, nssv775366, nssv775576, nssv775355, nssv775589, nssv775360, nssv775346, nssv775353, nssv775433, nssv775482, nssv775404, nssv775364, nssv775516, nssv775406, nssv775471, nssv775610, nssv775460, nssv775412, nssv775517, nssv775424

Samples

Known Genes

OR4C11, OR4C6, OR4P4, OR4S2

Method

SNP array

Analysis

Illumina SNP array copy number analysis

Platform

Not reported

Comments

Reference

Cooper_et_al_2011

Pubmed ID

Accession Number(s)

Frequency

Sample Size	17421
Observed Gain	16
Observed Loss	262
Observed Complex	0
Frequency	n/a