A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5540



Internal ID15550360
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:150986021..151030505hg38UCSC Ensembl
Outerchr6:151307157..151351641hg19UCSC Ensembl
Outerchr6:151348850..151393334hg18UCSC Ensembl
Outerchr6:151399271..151443755hg17UCSC Ensembl
Cytoband6q25.1
Allele length
AssemblyAllele length
hg3844485
hg1944485
hg1844485
hg1744485
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv4608
SamplesNA19129
Known GenesMTHFD1L
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5540
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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