A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv552178

Internal ID

16339587

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr10:112353831..112356817	hg38	UCSC Ensembl
Inner	chr10:114113589..114116575	hg19	UCSC Ensembl
Inner	chr10:114103579..114106565	hg18	UCSC Ensembl

Cytoband

10q25.2

Allele length

Assembly	Allele length
hg38	2987
hg19	2987
hg18	2987

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv758723, nssv758608, nssv758655, nssv758666, nssv758486, nssv758748, nssv758658, nssv758555, nssv758647, nssv758722, nssv758564, nssv758537, nssv758614, nssv758677, nssv758593, nssv758646, nssv758504, nssv758457, nssv758577, nssv758456, nssv758738, nssv758560, nssv758513, nssv758494, nssv758579, nssv758606, nssv758681, nssv758669, nssv758600, nssv758573, nssv758580, nssv758638, nssv758561, nssv758674, nssv758483, nssv758718, nssv758708, nssv758495, nssv758445, nssv758437, nssv758732, nssv758660, nssv758617, nssv758463, nssv758700, nssv758661, nssv758634, nssv758598, nssv758460, nssv758503, nssv758595, nssv758507, nssv758542, nssv758724, nssv758490, nssv758652, nssv758441, nssv758665, nssv758497, nssv758744, nssv758557, nssv758648, nssv758534, nssv758629, nssv758613, nssv758696, nssv758550, nssv758645, nssv758533, nssv758472, nssv758678, nssv758714, nssv758446, nssv758572, nssv758679, nssv758471, nssv758623, nssv758531, nssv758505, nssv758627, nssv758690, nssv758430, nssv758506, nssv758522, nssv758670, nssv758509, nssv758484, nssv758626, nssv758475, nssv758716, nssv758719, nssv758589, nssv758698, nssv758496, nssv758519, nssv758642, nssv758607, nssv758656, nssv758650, nssv758492, nssv758610, nssv758543, nssv758524, nssv758574, nssv758449, nssv758442, nssv758743, nssv758684, nssv758733, nssv758526, nssv758603, nssv758476, nssv758705, nssv758597, nssv758594, nssv758553, nssv758612, nssv758746, nssv758697, nssv758727, nssv758499, nssv758740, nssv758624, nssv758602, nssv758538, nssv758498, nssv758711, nssv758487, nssv758618, nssv758529, nssv758654, nssv758567, nssv758480, nssv758552, nssv758686, nssv758685, nssv758699, nssv758461, nssv758622, nssv758566, nssv758546, nssv758728, nssv758549, nssv758453, nssv758569, nssv758474, nssv758640, nssv758605, nssv758489, nssv758715, nssv758675, nssv758673, nssv758636, nssv758451, nssv758604, nssv758467, nssv758615, nssv758518, nssv758713, nssv758710, nssv758455, nssv758747, nssv758745, nssv758703, nssv758692, nssv758587, nssv758477, nssv758643, nssv758568, nssv758565, nssv758468, nssv758493, nssv758691, nssv758540, nssv758536, nssv758438, nssv758473, nssv758432, nssv758729, nssv758620, nssv758625, nssv758571, nssv758554, nssv758478, nssv758601, nssv758517, nssv758641, nssv758530, nssv758635, nssv758672, nssv758616, nssv758547, nssv758481, nssv758709, nssv758588, nssv758548, nssv758479, nssv758429, nssv758512, nssv758701, nssv758510, nssv758443, nssv758459, nssv758559, nssv758558, nssv758454, nssv758444, nssv758501, nssv758433, nssv758466, nssv758450, nssv758544, nssv758591, nssv758431, nssv758680, nssv758592, nssv758662, nssv758712, nssv758576, nssv758585, nssv758619, nssv758586, nssv758470, nssv758516, nssv758706, nssv758633, nssv758721, nssv758717, nssv758676, nssv758687, nssv758657, nssv758735, nssv758731, nssv758630, nssv758434, nssv758523, nssv758452, nssv758436, nssv758563, nssv758693, nssv758502, nssv758632, nssv758491, nssv758458, nssv758599, nssv758527, nssv758628, nssv758688, nssv758545, nssv758664, nssv758590, nssv758631, nssv758749, nssv758525, nssv758448, nssv758702, nssv758683, nssv758582, nssv758653, nssv758447, nssv758682, nssv758440, nssv758742, nssv758739, nssv758541, nssv758462, nssv758720, nssv758667, nssv758621, nssv758741, nssv758535, nssv758583, nssv758578, nssv758704, nssv758663, nssv758514, nssv758562, nssv758464, nssv758575, nssv758689, nssv758639, nssv758551, nssv758508, nssv758482, nssv758539, nssv758428, nssv758644, nssv758465, nssv758500, nssv758668, nssv758730, nssv758725, nssv758707, nssv758584, nssv758488, nssv758485, nssv758734, nssv758659, nssv758726, nssv758528, nssv758521, nssv758469, nssv758570, nssv758637, nssv758671, nssv758611, nssv758609, nssv758596, nssv758581, nssv758737, nssv758651, nssv758695, nssv758520, nssv758694, nssv758532, nssv758435, nssv758556, nssv758736, nssv758649, nssv758515, nssv758439, nssv758511

Samples

Known Genes

Method

SNP array

Analysis

Illumina SNP array copy number analysis

Platform

Not reported

Comments

Reference

Cooper_et_al_2011

Pubmed ID

Accession Number(s)

Frequency

Sample Size	17421
Observed Gain	0
Observed Loss	322
Observed Complex	0
Frequency	n/a