A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv546816

Internal ID

15987539

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr1:91766554..91767723	hg38	UCSC Ensembl
Inner	chr1:92232111..92233280	hg19	UCSC Ensembl
Inner	chr1:92004699..92005868	hg18	UCSC Ensembl

Cytoband

1p22.1

Allele length

Assembly	Allele length
hg38	1170
hg19	1170
hg18	1170

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv719208, nssv719177, nssv719151, nssv719223, nssv719184, nssv719290, nssv719163, nssv719188, nssv719279, nssv719232, nssv719189, nssv719215, nssv719172, nssv719281, nssv719278, nssv719133, nssv719273, nssv719203, nssv719219, nssv719276, nssv719253, nssv719280, nssv719260, nssv719210, nssv719166, nssv719251, nssv719206, nssv719205, nssv719237, nssv719213, nssv719296, nssv719200, nssv719147, nssv719243, nssv719171, nssv719266, nssv719247, nssv719190, nssv719212, nssv719127, nssv719207, nssv719227, nssv719293, nssv719176, nssv719170, nssv719197, nssv719236, nssv719168, nssv719155, nssv719138, nssv719135, nssv719294, nssv719263, nssv719185, nssv719156, nssv719139, nssv719136, nssv719181, nssv719146, nssv719287, nssv719182, nssv719220, nssv719198, nssv719194, nssv719277, nssv719164, nssv719162, nssv719289, nssv719239, nssv719284, nssv719196, nssv719275, nssv719240, nssv719270, nssv719186, nssv719288, nssv719250, nssv719230, nssv719131, nssv719255, nssv719160, nssv719282, nssv719157, nssv719216, nssv719140, nssv719137, nssv719252, nssv719183, nssv719241, nssv719228, nssv719192, nssv719292, nssv719242, nssv719161, nssv719174, nssv719274, nssv719234, nssv719245, nssv719235, nssv719211, nssv719229, nssv719256, nssv719221, nssv719179, nssv719129, nssv719271, nssv719264, nssv719209, nssv719202, nssv719143, nssv719134, nssv719267, nssv719249, nssv719238, nssv719195, nssv719173, nssv719199, nssv719159, nssv719149, nssv719152, nssv719204, nssv719126, nssv719244, nssv719285, nssv719153, nssv719262, nssv719218, nssv719258, nssv719225, nssv719272, nssv719295, nssv719261, nssv719257, nssv719246, nssv719283, nssv719180, nssv719187, nssv719145, nssv719269, nssv719148, nssv719132, nssv719175, nssv719150, nssv719128, nssv719201, nssv719259, nssv719130, nssv719144, nssv719141, nssv719193, nssv719142, nssv719217, nssv719154, nssv719214, nssv719158, nssv719265, nssv719286, nssv719191, nssv719254, nssv719233, nssv719231, nssv719268, nssv719224, nssv719167, nssv719165, nssv719222, nssv719178, nssv719248, nssv719291, nssv719169, nssv719226

Samples

Known Genes

Method

SNP array

Analysis

Illumina SNP array copy number analysis

Platform

Not reported

Comments

Reference

Cooper_et_al_2011

Pubmed ID

Accession Number(s)

Frequency

Sample Size	17421
Observed Gain	0
Observed Loss	171
Observed Complex	0
Frequency	n/a