A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5223



Internal ID15203325
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:22151685..22193155hg38UCSC Ensembl
Outerchr6:22151914..22193384hg19UCSC Ensembl
Outerchr6:22259893..22301363hg18UCSC Ensembl
Outerchr6:22259893..22301363hg17UCSC Ensembl
Cytoband6p22.3
Allele length
AssemblyAllele length
hg3841471
hg1941471
hg1841471
hg1741471
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv531, nssv9685, nssv4897
SamplesNA18507, NA19240, NA19129
Known GenesCASC15
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5223
Frequency
Sample Size9
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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