A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv520189



Internal ID15100796
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:160041722..160125835hg38UCSC Ensembl
Innerchr1:160011512..160095625hg19UCSC Ensembl
Innerchr1:158278136..158362249hg18UCSC Ensembl
Innerchr1:156824585..156908698hg17UCSC Ensembl
Cytoband1q23.2
Allele length
AssemblyAllele length
hg3884114
hg1984114
hg1884114
hg1784114
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv661554, nssv688598, nssv705109
Samples
Known GenesATP1A2, IGSF8, KCNJ10, KCNJ9
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv520189
Frequency
Sample Size2026
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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