A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv5179



Internal ID15549962
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:5121590..5166793hg38UCSC Ensembl
Outerchr6:5121824..5167027hg19UCSC Ensembl
Outerchr6:5066823..5112026hg18UCSC Ensembl
Outerchr6:5066823..5112026hg17UCSC Ensembl
Cytoband6p25.1
Allele length
AssemblyAllele length
hg3845204
hg1945204
hg1845204
hg1745204
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv8210
SamplesNA12156
Known GenesLYRM4, MIR3691
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv5179
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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