A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv517842



Internal ID15445135
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:41796218..41805492hg38UCSC Ensembl
Innerchr1:42261889..42271163hg19UCSC Ensembl
Innerchr1:42034476..42043750hg18UCSC Ensembl
Innerchr1:41930982..41940256hg17UCSC Ensembl
Cytoband1p34.2
Allele length
AssemblyAllele length
hg389275
hg199275
hg189275
hg179275
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv695246
Samples
Known GenesHIVEP3
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv517842
Frequency
Sample Size2026
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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