A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv517740



Internal ID15098347
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:31727863..32666510hg38UCSC Ensembl
Innerchr15:32020066..32958711hg19UCSC Ensembl
Innerchr15:29807358..30746003hg18UCSC Ensembl
Innerchr15:29807358..30746003hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg38938648
hg19938646
hg18938646
hg17938646
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv657987, nssv651773, nssv662013, nssv672893, nssv653053, nssv693058, nssv658875, nssv691902, nssv692870, nssv666733, nssv681301, nssv689536, nssv657438, nssv653636, nssv689664, nssv674304, nssv677149, nssv654443, nssv663575, nssv659496, nssv701977, nssv689995, nssv680080, nssv700373, nssv651687, nssv664215, nssv665493, nssv676005, nssv688927, nssv673892, nssv677190, nssv687324, nssv656139, nssv662882, nssv652380, nssv690178, nssv652996, nssv685160, nssv686761, nssv665287, nssv685293, nssv662489, nssv692989, nssv671706, nssv693568, nssv657365, nssv689284, nssv685202, nssv656329, nssv656700, nssv690151, nssv674828, nssv663642, nssv665202, nssv687104, nssv678667, nssv677338, nssv654357, nssv691286, nssv658248, nssv684145, nssv683002, nssv672619, nssv678615, nssv673251, nssv657477, nssv672210, nssv683642, nssv664195, nssv676174, nssv671913, nssv657860, nssv677019, nssv682981, nssv659850, nssv656303, nssv686102, nssv681993, nssv655210, nssv683164, nssv668722, nssv681056, nssv671087, nssv683725, nssv677653, nssv674472, nssv663609, nssv654640, nssv652859, nssv677765, nssv683464, nssv675387, nssv666096, nssv688260, nssv683741, nssv681503, nssv661198, nssv670310, nssv666339, nssv661039, nssv666151, nssv677834, nssv673178, nssv652799, nssv679077
Samples
Known GenesARHGAP11A, CHRNA7, GOLGA8K, GOLGA8O, GOLGA8R, LOC100996255, SCG5, ULK4P1, ULK4P2, ULK4P3, WHAMMP1
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv517740
Frequency
Sample Size2026
Observed Gain55
Observed Loss50
Observed Complex0
Frequencyn/a


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