A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv517451



Internal ID15098058
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:3549655..3611814hg38UCSC Ensembl
Innerchr16:3599655..3661815hg19UCSC Ensembl
Innerchr16:3539656..3601816hg18UCSC Ensembl
Innerchr16:3539656..3601816hg17UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg3862160
hg1962161
hg1862161
hg1762161
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv653975, nssv685534, nssv679617, nssv664564, nssv652929, nssv692962, nssv692835, nssv666921, nssv666645, nssv677811, nssv691831, nssv682653, nssv658323, nssv660828, nssv662405, nssv661957, nssv688654, nssv655260, nssv652117, nssv691419, nssv669930, nssv685485, nssv666614, nssv663104, nssv651815, nssv656780, nssv665204, nssv670473, nssv687634, nssv684752, nssv678595, nssv652280, nssv676852, nssv683165, nssv679896, nssv666872, nssv675085, nssv678271, nssv672174, nssv693407, nssv657687, nssv677728, nssv667425, nssv661902, nssv686618, nssv673338, nssv658713, nssv663279, nssv703490, nssv668724, nssv655687, nssv691306, nssv691500, nssv682877, nssv678430, nssv660432
Samples
Known GenesNLRC3, SLX4
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv517451
Frequency
Sample Size2026
Observed Gain0
Observed Loss56
Observed Complex0
Frequencyn/a


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