A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv517440



Internal ID15098047
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:55572903..55836936hg38UCSC Ensembl
Innerchr11:55340379..55604412hg19UCSC Ensembl
Innerchr11:55096955..55360988hg18UCSC Ensembl
Innerchr11:55096955..55360988hg17UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg38264034
hg19264034
hg18264034
hg17264034
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv664079, nssv665079, nssv672128, nssv690882, nssv670090, nssv671906, nssv683395, nssv692143, nssv660052, nssv662264, nssv679868, nssv684005, nssv684206, nssv682127, nssv669922, nssv688501, nssv675494, nssv677650, nssv682535, nssv653964, nssv693131, nssv653721, nssv667891, nssv663773, nssv655986, nssv658345, nssv658850, nssv656651, nssv674269, nssv687148, nssv658528, nssv663439, nssv687574, nssv675143, nssv652338, nssv683704, nssv692187, nssv693458, nssv672520, nssv667616, nssv678694, nssv655023, nssv698709, nssv657339, nssv659815, nssv688989, nssv687631, nssv676543, nssv656243, nssv689197, nssv659935, nssv654421, nssv683332, nssv688632, nssv692957, nssv672789, nssv679137, nssv690586, nssv673703, nssv657912, nssv659554, nssv660987, nssv688791, nssv668168, nssv657108, nssv659155, nssv669421, nssv670686, nssv690124, nssv652809, nssv693675, nssv673369, nssv688021, nssv691291, nssv666965, nssv682999, nssv679891, nssv688357, nssv656742, nssv658610, nssv669031, nssv653278, nssv687748, nssv691569, nssv657527, nssv680010, nssv665114, nssv665915, nssv676000, nssv653945, nssv664276, nssv666314, nssv670414, nssv676128, nssv689033, nssv654252, nssv685177, nssv692444, nssv686441, nssv655058, nssv656443, nssv665008, nssv676372, nssv688325, nssv669620, nssv673865, nssv677786, nssv676252, nssv663120, nssv671584, nssv684470, nssv666890, nssv687809, nssv672979, nssv657609, nssv666119, nssv688217, nssv664424, nssv671867, nssv675193, nssv675206, nssv679397, nssv681905, nssv669958, nssv688149, nssv661064, nssv668097, nssv665761, nssv676731, nssv660731, nssv667310, nssv675254, nssv668401, nssv688102, nssv691970, nssv681017, nssv701879, nssv687955, nssv679333, nssv652955, nssv676892, nssv670832, nssv679041, nssv656878, nssv666202, nssv682824, nssv693396, nssv662103, nssv670729, nssv651974, nssv682725, nssv684064, nssv660170, nssv692252, nssv686942, nssv676604, nssv677690, nssv668894, nssv661585, nssv679869, nssv664913, nssv689354, nssv663146, nssv665513, nssv673819, nssv659099, nssv667196, nssv683273, nssv684797, nssv677587, nssv685288, nssv681097, nssv652130, nssv662421, nssv662464, nssv670797, nssv693144, nssv661380, nssv667837, nssv669593, nssv686332, nssv661219, nssv660156, nssv655706, nssv659009, nssv669447, nssv689851, nssv684345, nssv680106, nssv653658, nssv680140, nssv687021, nssv661708, nssv656257, nssv661036, nssv656456, nssv663355, nssv667516, nssv693563, nssv653566, nssv661137, nssv684612, nssv662573, nssv693542, nssv670582, nssv678428, nssv660610, nssv670023, nssv680992, nssv701052, nssv679370, nssv654639, nssv673264, nssv682043, nssv682862, nssv655582, nssv678997, nssv662399, nssv689088, nssv664773, nssv675331, nssv675827, nssv668345, nssv685395, nssv663663, nssv669828, nssv665645, nssv669169, nssv701053, nssv653134, nssv666745, nssv681639, nssv685771, nssv672547, nssv685510, nssv691246, nssv656002, nssv665835, nssv668698, nssv661940, nssv660210, nssv685347, nssv687191, nssv668074, nssv681936, nssv667703, nssv658278, nssv685901, nssv653327, nssv653457, nssv669844, nssv678589, nssv676570, nssv665860, nssv661976, nssv668948, nssv683505, nssv681734, nssv678879, nssv688241, nssv671961, nssv690994, nssv669210, nssv657575, nssv661827, nssv654491, nssv660884, nssv670189, nssv652378, nssv678502, nssv652684, nssv653425, nssv661594, nssv673063, nssv682695, nssv656037, nssv657712, nssv679351, nssv655729, nssv657546, nssv674330, nssv660864, nssv655204, nssv677184, nssv664305, nssv672999, nssv674299, nssv686892, nssv674019, nssv680664, nssv657899, nssv678662, nssv658967, nssv662507, nssv668842, nssv681968, nssv685158, nssv660288, nssv657833, nssv672561, nssv663814, nssv657736, nssv671604, nssv653671, nssv670951, nssv668611, nssv692930, nssv681031, nssv687343, nssv690711, nssv658106, nssv690527, nssv666689, nssv672012, nssv675692, nssv661896, nssv681273, nssv685008, nssv689121, nssv687652, nssv665576, nssv674675, nssv676464, nssv687000, nssv693715, nssv687128, nssv656944, nssv677720, nssv687905, nssv689892, nssv700828, nssv652706, nssv654663, nssv684710, nssv684819, nssv674193, nssv684485, nssv665987, nssv679689, nssv693625, nssv677383, nssv652548, nssv652574, nssv655355, nssv664376, nssv666027, nssv669089, nssv663021, nssv669639, nssv680166, nssv654799, nssv680907, nssv670709, nssv665037, nssv675441, nssv658748, nssv666336, nssv691666, nssv660428, nssv686859, nssv672346, nssv687927, nssv684881, nssv666586, nssv689061, nssv689569, nssv666731, nssv683665, nssv654046, nssv673443, nssv693428, nssv656300, nssv668661, nssv681210, nssv672366, nssv659352, nssv664561, nssv660467, nssv669048, nssv664605, nssv685939, nssv679941, nssv687204, nssv675665, nssv684521, nssv665554, nssv659656, nssv682196, nssv659081, nssv676843, nssv655519, nssv693738, nssv674742, nssv669271, nssv688903, nssv659141, nssv660583, nssv658733, nssv693487, nssv693869, nssv667222, nssv663793, nssv654750, nssv663697, nssv692051, nssv692832, nssv674770, nssv689827, nssv659448, nssv663640, nssv688544, nssv692324, nssv657131, nssv685196, nssv674045, nssv682953, nssv687788, nssv670982, nssv684750, nssv664331, nssv674524, nssv692356, nssv660647, nssv675594, nssv653881, nssv667768, nssv676291, nssv676501, nssv683044, nssv682254, nssv681822, nssv657378, nssv658591, nssv681664, nssv654946, nssv688255, nssv670063, nssv656114, nssv659605, nssv666070, nssv693848, nssv669236, nssv672653, nssv680584, nssv663370, nssv673632, nssv689165, nssv668470, nssv658468, nssv660485, nssv686562, nssv691153, nssv656200, nssv679059, nssv680034, nssv652092, nssv678165, nssv703353, nssv680593, nssv681952, nssv687557, nssv687838, nssv651904, nssv688856, nssv666093, nssv678771, nssv679821, nssv652758, nssv665543, nssv679268, nssv680695, nssv681247, nssv681967, nssv662134, nssv672065, nssv678291, nssv664402, nssv665304, nssv675626, nssv677609, nssv662650, nssv693278, nssv692604, nssv667375, nssv677085, nssv676631, nssv675401, nssv684730, nssv690000, nssv691499, nssv669187, nssv677212, nssv678044, nssv652342, nssv655275, nssv683683, nssv692024, nssv662376, nssv686671, nssv652391, nssv653185, nssv675539, nssv659217, nssv668579, nssv690547, nssv669994, nssv687847, nssv663537, nssv669469, nssv652277, nssv689965, nssv690338, nssv700597, nssv686660, nssv654373, nssv655643, nssv662855, nssv693827, nssv665703, nssv692775, nssv693325, nssv671684, nssv664547, nssv680371, nssv677371, nssv667046, nssv692275
Samples
Known GenesOR4C11, OR4C16, OR4C6, OR4P4, OR4S2, OR5D13, OR5D14, OR5D18, OR5L1, OR5L2
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv517440
Frequency
Sample Size2026
Observed Gain41
Observed Loss513
Observed Complex0
Frequencyn/a


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