A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv517335



Internal ID15097942
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:135655608..135803389hg38UCSC Ensembl
Innerchr9:138547454..138695235hg19UCSC Ensembl
Innerchr9:137687275..137835056hg18UCSC Ensembl
Innerchr9:135773399..135921180hg17UCSC Ensembl
Cytoband9q34.3
Allele length
AssemblyAllele length
hg38147782
hg19147782
hg18147782
hg17147782
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv674358, nssv672753, nssv690229, nssv678115, nssv653400, nssv678766, nssv664769, nssv660316, nssv688828, nssv690991, nssv665030, nssv684587, nssv660223, nssv656752, nssv670728, nssv687772, nssv689692, nssv665700, nssv664572, nssv662742, nssv661262, nssv653351, nssv663806, nssv677347, nssv661214, nssv670748, nssv680028, nssv693845, nssv667907, nssv689350, nssv657675, nssv682147, nssv657194, nssv667874, nssv656930, nssv685858, nssv673575, nssv662789, nssv660147, nssv663768, nssv676901, nssv669879, nssv676028, nssv665853, nssv652269, nssv674015, nssv657521, nssv679747, nssv688238, nssv682616, nssv668966, nssv677382, nssv669464, nssv660069, nssv685548, nssv667335, nssv660661, nssv655127, nssv664623, nssv663750, nssv685135, nssv667634, nssv674945, nssv684267, nssv674669, nssv683832, nssv683392, nssv678158, nssv675274, nssv668502, nssv665787, nssv669167, nssv682275, nssv651759, nssv675374, nssv675246, nssv679770, nssv676461, nssv674213, nssv681013, nssv692235, nssv673547, nssv668746, nssv666271, nssv682102, nssv662572, nssv657698, nssv691075, nssv691089
Samples
Known GenesKCNT1, LCN9, SOHLH1
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv517335
Frequency
Sample Size2026
Observed Gain0
Observed Loss89
Observed Complex0
Frequencyn/a


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