A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv517329

Internal ID

15097936

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr6:92538625..94814709	hg38	UCSC Ensembl
Inner	chr6:93248343..95524427	hg19	UCSC Ensembl
Inner	chr6:93305064..95581148	hg18	UCSC Ensembl
Inner	chr6:93305064..95581148	hg17	UCSC Ensembl

Cytoband

6q16.1

Allele length

Assembly	Allele length
hg38	2276085
hg19	2276085
hg18	2276085
hg17	2276085

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv663092, nssv654654, nssv652184, nssv689221, nssv664764, nssv683455, nssv698301, nssv676947, nssv684374, nssv659027, nssv686769, nssv662062, nssv656711, nssv680074, nssv693505, nssv675454, nssv660042, nssv682098, nssv666085, nssv666883, nssv678084, nssv661946, nssv670379, nssv681859, nssv694564, nssv680310, nssv678156, nssv689005, nssv674618, nssv687506, nssv664325, nssv677108, nssv687418, nssv679031, nssv652585, nssv673724, nssv666528, nssv674577, nssv682893, nssv682457, nssv681133, nssv666486, nssv694298, nssv692952, nssv672271, nssv667368, nssv657626, nssv685317, nssv654299, nssv654234, nssv657087, nssv653047, nssv654737, nssv683629, nssv689773, nssv653195, nssv672643, nssv662157, nssv689026, nssv682004, nssv675680, nssv670425, nssv665278, nssv659642, nssv686192, nssv673441, nssv697264, nssv666485, nssv653127, nssv675552, nssv686883, nssv655798, nssv673036, nssv653831, nssv661502, nssv652606, nssv680577, nssv679099, nssv687601, nssv661479, nssv653585, nssv683601, nssv693584, nssv684412, nssv663960, nssv658726, nssv686319, nssv693672, nssv682425, nssv681628, nssv673883, nssv677107, nssv689525, nssv665920, nssv684915, nssv673975, nssv666184, nssv691660, nssv681613, nssv689222, nssv686253, nssv667130, nssv670055, nssv684722, nssv663012, nssv673497, nssv688670, nssv660280, nssv684445, nssv655158, nssv661087, nssv703111, nssv684655, nssv671596, nssv674462, nssv679411, nssv669675, nssv670128, nssv667984, nssv685107, nssv656815, nssv676671, nssv678977, nssv685567, nssv690618, nssv674423, nssv660852, nssv686653, nssv680474, nssv671688, nssv663589, nssv680441, nssv660378, nssv665911, nssv692352, nssv656985, nssv659998, nssv660636, nssv657446, nssv684702, nssv698035, nssv671245, nssv699707, nssv653801, nssv663961, nssv680362, nssv677139, nssv671158, nssv661209, nssv661643, nssv695655, nssv660697, nssv662779, nssv678058, nssv687654, nssv661430, nssv673412, nssv656663, nssv652911, nssv663292, nssv689774, nssv677332, nssv696610, nssv679603, nssv663267, nssv678022, nssv677250, nssv680564, nssv679330, nssv688941, nssv674443, nssv663713, nssv666424, nssv696389, nssv690692, nssv677742, nssv659789, nssv671557, nssv687036, nssv685969, nssv656870, nssv656555, nssv655953, nssv688622, nssv673213, nssv658902, nssv654143, nssv663364, nssv667413, nssv690170, nssv658462, nssv658133, nssv673738, nssv657304, nssv669202, nssv656292, nssv671629, nssv679450, nssv654486, nssv691430, nssv668026, nssv693301, nssv664014, nssv665620, nssv662939, nssv700673, nssv686242, nssv671481, nssv695626, nssv683813, nssv661700, nssv654022, nssv666835, nssv667476, nssv666928, nssv664069, nssv658270, nssv700819, nssv671726, nssv659342, nssv658079, nssv657431, nssv692133, nssv658002, nssv670664, nssv658646, nssv676089, nssv688895, nssv654596, nssv683150, nssv666223, nssv659118, nssv683247, nssv668027, nssv685004, nssv692085, nssv681540, nssv686473, nssv674037, nssv663906, nssv652149

Samples

Known Genes

Method

SNP array

Analysis

Sample-level CNVs

Platform

GPL6434

Comments

Reference

Shaikh_et_al_2009

Pubmed ID

Accession Number(s)

Frequency

Sample Size	2026
Observed Gain	2
Observed Loss	239
Observed Complex	0
Frequency	n/a