A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv517233



Internal ID15097840
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:53141541..53286984hg38UCSC Ensembl
Innerchr3:53175557..53321002hg19UCSC Ensembl
Innerchr3:53150597..53296042hg18UCSC Ensembl
Innerchr3:53150597..53296042hg17UCSC Ensembl
Cytoband3p21.1
Allele length
AssemblyAllele length
hg38145444
hg19145446
hg18145446
hg17145446
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv652669, nssv654081, nssv658352, nssv677479, nssv705763, nssv656747, nssv682709, nssv692851, nssv669562, nssv660457
Samples
Known GenesDCP1A, PRKCD, TKT
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv517233
Frequency
Sample Size2026
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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