A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv517191

Internal ID

15444484

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr15:24084571..24569435	hg38	UCSC Ensembl
Inner	chr15:24329718..24814582	hg19	UCSC Ensembl
Inner	chr15:21880811..22365675	hg18	UCSC Ensembl
Inner	chr15:21880811..22365675	hg17	UCSC Ensembl

Cytoband

15q11.2

Allele length

Assembly	Allele length
hg38	484865
hg19	484865
hg18	484865
hg17	484865

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv674409, nssv664499, nssv652623, nssv665222, nssv653974, nssv684500, nssv663942, nssv685437, nssv668422, nssv667723, nssv673559, nssv673176, nssv667677, nssv679076, nssv691473, nssv685958, nssv658167, nssv672348, nssv688221, nssv673080, nssv671869, nssv661406, nssv668154, nssv662984, nssv652198, nssv691976, nssv679019, nssv657316, nssv668843, nssv669474, nssv656393, nssv655327, nssv688082, nssv670835, nssv678047, nssv685837, nssv678893, nssv662141, nssv660622, nssv691999, nssv685757, nssv681606, nssv686737, nssv673504, nssv670093, nssv664728, nssv686808, nssv686492, nssv684332, nssv693760, nssv657297, nssv671771, nssv655709, nssv681691, nssv667565, nssv668333, nssv668586, nssv700266, nssv694852, nssv678939, nssv674251, nssv685436, nssv689333, nssv668100, nssv672441, nssv666206, nssv690442, nssv671845, nssv674471, nssv691646, nssv671912, nssv655628, nssv683886, nssv679615, nssv655806, nssv664479, nssv663983, nssv659715, nssv658766, nssv687323, nssv674364, nssv693461, nssv661491, nssv655168, nssv686675, nssv687545, nssv659849, nssv663473, nssv687518, nssv655650, nssv656632, nssv654316, nssv672262, nssv674604, nssv671394, nssv654001, nssv704699, nssv684499, nssv674556, nssv664915, nssv652765, nssv663261, nssv680508, nssv688152, nssv691351, nssv704509, nssv673946, nssv667215, nssv706011, nssv652046, nssv685636, nssv654207, nssv685978, nssv689260, nssv681690, nssv661102, nssv666047, nssv686947, nssv667495, nssv701268, nssv673706, nssv668009, nssv693567, nssv681422, nssv665610, nssv695530, nssv690953, nssv665746, nssv662272, nssv688419, nssv660100, nssv691014, nssv672858, nssv676656, nssv679400, nssv667494, nssv672563, nssv705355, nssv663472

Samples

Known Genes

Method

SNP array

Analysis

Sample-level CNVs

Platform

GPL6434

Comments

Reference

Shaikh_et_al_2009

Pubmed ID

Accession Number(s)

Frequency

Sample Size	2026
Observed Gain	44
Observed Loss	95
Observed Complex	0
Frequency	n/a